Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924300.1_cds_XP_016472663.1_64875
CDS Infomation

[gene=LOC107794662] [db_xref=GeneID:107794662] [protein=glucan endo-1,3-beta-glucosidase 4-like] [protein_id=XP_016472663.1] [location=join(17995..18058,18286..19533,20373..20400,20489..20633,22552..22765,23893..23966,25239..25386,25633..25730)] [gbkey=CDS]
Sequence

ATGATGCTCAAACCGTGGCTTGCGATATCCATACTATTTTCTTTCCTCATCTCAAATGTA
ACAGGTGCATTTGTTGGAATAAACATTGGCACCGATGTTTCAAATTTACCGCCAGCTTCG
GATGTGGTTGCACTCCTCAAAGTTAATCAAATAACTCATGTGCGCCTATTTAATGCTGAT
GCTCATATGTTGAATGCGTTAGCCAACTCTAGTATCGAAGTTATTATTGGTGTTACAAAT
GATGAAGTCTTAGGGATCGGAGAATCTCCATCAGCTGCAGCTGCTTGGGTAAATAAAAAT
GTAGCAGCTTACATGCCCTCTACAAATATTACGGCTATTGCCGTGGGTAGTGAAGTTCTC
ACCGCAATCCCAAACGCTGCACCGGTTTTGGTTCCCGCTATGAATTACTTGCATAAAGCA
TTAGTGGCTTCACAACTTAATCACCAAGTAAAAGTTTCAACCCCGCAATCTATGGACGTG
ATTGCTAGGGCATTTCCTCCTTCCACTGCCACTTTCAATTCTTCTTGGAACTCAACAATC
TTCCAGATCCTTCAGTTTCTAAGAAACACAAACTCATACTTCATGTTGAATGCTTATCCA
TATTATGAATACGTGCACTCCGATGGAATCTTTCCGATTGAATATGCTCTTTTCCAACCA
CTCTCCGCAGTGAAGCAAATTGTTGACCCAAACACCCTGTTTCACTATGTAAGTATGTTT
GATGCTTTAGTTGATGCTGCATACAACTCTATAGCAGCCCTCAACTTTTCCGATATCCCA
ATTGTTGTGACCGAGACTGGTTGGCCGTGGGATGGTGGTGCCAATGAGCCTGATGCTTCT
AAGGAAAATGCCGAAACATTTAATAATAACCTGATTCGGCGTGTTTCAAATGATACTGGC
CCACCTAGTCAACCAAAAAATCCCATTAACACCTTTATTTACGAGATGTTCAATGAAGAC
AAAAGACCTGGACCGATATCGGAAAGAAGCTGGGGTATCTTTTCTACAAATGGGAGCGAG
ATTTATTCCCTTAGCTTGGGTTCCTCGGCCGGTATTTCAGACAATTCTACTGCAGTTTTC
TGTATAGCGAAAAAGGGTGCAGATGAGAACAAACTGCAAGATGGAATTAACTGGGCTTGT
GGCCAGGGACATGCTAATTGCAGTGCAATTCAATCTGGACAGCCTTGTTATTTTCCAGAT
ACGTTGCAAAATCATGCTTCTTATGCGTACAATGACTATTATCAGAGAATGCGAAGTCTT
GGTGGAACATGCGATTTTGATGGTACAGCAACAACGACAACACAAGATCCAAGTTCCAAA
ACATGTAAATTTACAGGAAGTTCGACTCCAGGTGGGCTGTTTCCTCCGGCAGCATTTGGA
CCTATCAGTCCGACTTCTCAGGGTCCAACGATTCGAGCAACTGTTATCGTGTATACATTG
GCTGTATTTTCTGCTTTGTTGATGCTTGATGTGAATGTGCATTTTTCTTCAATGTACGGC
GGAGCTCCGTCGGGCGGAATAGGAATCGGTAGTAGTAGTGGAGGAAGAACATGGCCGTCG
ACGACGTCGGTGTCTAGTTCCGGTAAGAGAATACAGAAGGAAATGACTGAACTAAGCATA
GAGGCACCACCAGATTGTGCAGCTGGGCCTAAAGGAGATAATCTTTACCATTGGGTTGCT
ACCCTCTTCGGCCCACCTGGAACACCTTATGAGGGTGGAATATATTTTCTCGATATAACC
TTCCCTTCTGATTATCCATTTAAACCTCCAAAGGTTGTATTCAAAACTCGCATATATCAT
TGCAATGTTGAGCCTTCTGGAAATGTTAGCTTGGACATCCTAACAGATAACTGGAGTCCA
GCATTAACAATCTCGAAAGTACTACTTGCTCTGAGATCAATGTTCACCACTCCAGAAACC
TATAAGCCAGTTGTTCCTGGTATTGCACACTTATACTTTGAAGATAAAGCCAAACATGAT
GAAATAGCTACAGAATGGACACTGCGATTTGCAAGGTGA

Peptide Sequence

PEP ID

XP_016472663.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Nicotiana tabacum]
Sequence

MMLKPWLAISILFSFLISNVTGAFVGINIGTDVSNLPPASDVVALLKVNQITHVRLFNAD
AHMLNALANSSIEVIIGVTNDEVLGIGESPSAAAAWVNKNVAAYMPSTNITAIAVGSEVL
TAIPNAAPVLVPAMNYLHKALVASQLNHQVKVSTPQSMDVIARAFPPSTATFNSSWNSTI
FQILQFLRNTNSYFMLNAYPYYEYVHSDGIFPIEYALFQPLSAVKQIVDPNTLFHYVSMF
DALVDAAYNSIAALNFSDIPIVVTETGWPWDGGANEPDASKENAETFNNNLIRRVSNDTG
PPSQPKNPINTFIYEMFNEDKRPGPISERSWGIFSTNGSEIYSLSLGSSAGISDNSTAVF
CIAKKGADENKLQDGINWACGQGHANCSAIQSGQPCYFPDTLQNHASYAYNDYYQRMRSL
GGTCDFDGTATTTTQDPSSKTCKFTGSSTPGGLFPPAAFGPISPTSQGPTIRATVIVYTL
AVFSALLMLDVNVHFSSMYGGAPSGGIGIGSSSGGRTWPSTTSVSSSGKRIQKEMTELSI
EAPPDCAAGPKGDNLYHWVATLFGPPGTPYEGGIYFLDITFPSDYPFKPPKVVFKTRIYH
CNVEPSGNVSLDILTDNWSPALTISKVLLALRSMFTTPETYKPVVPGIAHLYFEDKAKHD
EIATEWTLRFAR

Transcript Sequence

Gene sequence data has not been registered.